Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm26323-201ENSMUST00000157743 175 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm16027-201ENSMUST00000161618 758 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm28952-201ENSMUST00000189285 681 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm37669-201ENSMUST00000192184 820 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 CT573019.1-201ENSMUST00000227762 1689 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm15229-201ENSMUST00000146636 1398 ntBASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usp40Q8BWR4 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm22774-201ENSMUST00000102084 109 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm25311-201ENSMUST00000104136 132 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm44251-201ENSMUST00000204963 442 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm34424-201ENSMUST00000213400 782 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 AC127242.3-201ENSMUST00000222009 580 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm9267-201ENSMUST00000222831 404 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 AC165157.1-201ENSMUST00000222981 580 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Dalir-201ENSMUST00000188773 2170 ntBASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usp40Q8BWR4 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Gm42820-201ENSMUST00000200084 3063 ntBASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usp40Q8BWR4 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm25093-201ENSMUST00000103993 132 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm12468-201ENSMUST00000116189 404 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm14489-201ENSMUST00000120868 901 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm12752-201ENSMUST00000121657 811 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm22262-201ENSMUST00000158713 86 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm8245-201ENSMUST00000182434 987 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm8502-201ENSMUST00000185708 901 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm18699-201ENSMUST00000190713 243 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm29288-201ENSMUST00000191582 901 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.96□□□□□ -0.82
Usp40Q8BWR4 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.96□□□□□ -0.82
Usp40Q8BWR4 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms