Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.57□□□□□ -1.04
Smarcc2Q6PDG5 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm14465-201ENSMUST00000120603 567 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm13282-201ENSMUST00000121577 545 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm9697-201ENSMUST00000147052 997 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm22795-201ENSMUST00000157233 118 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm24782-201ENSMUST00000157641 132 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Mir3060-201ENSMUST00000175339 83 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm4785-201ENSMUST00000191025 751 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm37295-201ENSMUST00000192186 109 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm35108-201ENSMUST00000194321 699 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm33191-201ENSMUST00000195604 699 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm34583-203ENSMUST00000202586 454 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm44607-201ENSMUST00000205611 1090 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm8804-201ENSMUST00000212292 798 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm20900-201ENSMUST00000078729 472 ntBASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.56□□□□□ -1.04
Smarcc2Q6PDG5 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 AC154257.1-201ENSMUST00000224811 1525 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm25276-201ENSMUST00000104300 124 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm26729-201ENSMUST00000180744 352 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm44979-201ENSMUST00000206218 287 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm18503-201ENSMUST00000220340 728 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.55□□□□□ -1.04
Smarcc2Q6PDG5 Gm40778-201ENSMUST00000217825 1344 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms