Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 AC122372.1-201ENSMUST00000215344 280 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm33778-201ENSMUST00000216884 704 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm5087-204ENSMUST00000225820 645 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Col8a1Q00780 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm23448-201ENSMUST00000083151 104 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm4149-201ENSMUST00000099371 276 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm2136-201ENSMUST00000193945 2577 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm16433-201ENSMUST00000062429 1984 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm43158-201ENSMUST00000198484 1555 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.69□□□□□ -1.34
Col8a1Q00780 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col8a1Q00780 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm44792-201ENSMUST00000207008 1628 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm45280-201ENSMUST00000210484 2552 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col8a1Q00780 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm5120-201ENSMUST00000215231 2414 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm11389-201ENSMUST00000121407 430 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm16411-201ENSMUST00000122164 1100 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm23888-201ENSMUST00000122690 253 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Mir6340-201ENSMUST00000183857 119 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm7560-201ENSMUST00000187748 873 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm17867-201ENSMUST00000188981 391 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm44181-201ENSMUST00000203106 483 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm19254-201ENSMUST00000204828 294 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm44688-201ENSMUST00000209083 537 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm4928-201ENSMUST00000219622 850 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.68□□□□□ -1.34
Col8a1Q00780 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.68□□□□□ -1.34
Col8a1Q00780 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col8a1Q00780 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col8a1Q00780 Mir350-201ENSMUST00000083639 99 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms