Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.49□□□□□ -1.05
Pde6aP27664 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Gm43040-201ENSMUST00000202399 558 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Gm43905-201ENSMUST00000204516 204 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Gm45319-201ENSMUST00000210220 318 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.49□□□□□ -1.05
Pde6aP27664 Gm45782-201ENSMUST00000212670 366 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 AC133948.2-201ENSMUST00000217850 378 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.49□□□□□ -1.05
Pde6aP27664 Gm9110-201ENSMUST00000219035 617 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Pde6aP27664 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Pde6aP27664 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Pde6aP27664 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Pde6aP27664 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.49□□□□□ -1.05
Pde6aP27664 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Pde6aP27664 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
Pde6aP27664 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Pde6aP27664 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 AC118639.1-203ENSMUST00000228425 2016 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm44130-201ENSMUST00000205157 3004 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm11926-201ENSMUST00000118520 430 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm27026-201ENSMUST00000183003 892 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.48□□□□□ -1.05
Pde6aP27664 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gm18428-201ENSMUST00000194986 791 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm6649-201ENSMUST00000199743 1165 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 Gm6581-201ENSMUST00000214545 260 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.48□□□□□ -1.05
Pde6aP27664 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Pde6aP27664 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Pde6aP27664 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.47□□□□□ -1.05
Pde6aP27664 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Pde6aP27664 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Pde6aP27664 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.47□□□□□ -1.05
Pde6aP27664 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Pde6aP27664 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms