Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Gm44471-201ENSMUST00000197963 100 ntBASIC6.45□□□□□ -1.38
P20040 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 Gm20274-201ENSMUST00000206967 584 ntBASIC6.45□□□□□ -1.38
P20040 Gm45782-201ENSMUST00000212670 366 ntBASIC6.45□□□□□ -1.38
P20040 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.45□□□□□ -1.38
P20040 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
P20040 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.45□□□□□ -1.38
P20040 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.45□□□□□ -1.38
P20040 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.45□□□□□ -1.38
P20040 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.45□□□□□ -1.38
P20040 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
P20040 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.45□□□□□ -1.38
P20040 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
P20040 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
P20040 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
P20040 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.44□□□□□ -1.38
P20040 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.44□□□□□ -1.38
P20040 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
P20040 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Mir688-201ENSMUST00000102055 75 ntBASIC6.44□□□□□ -1.38
P20040 Gm15576-201ENSMUST00000117806 583 ntBASIC6.44□□□□□ -1.38
P20040 Gm11474-201ENSMUST00000120814 277 ntBASIC6.44□□□□□ -1.38
P20040 Gm16523-201ENSMUST00000121253 592 ntBASIC6.44□□□□□ -1.38
P20040 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.44□□□□□ -1.38
P20040 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.44□□□□□ -1.38
P20040 Gm5181-201ENSMUST00000183140 971 ntBASIC6.44□□□□□ -1.38
P20040 Gm9423-201ENSMUST00000183173 997 ntBASIC6.44□□□□□ -1.38
P20040 Gm27542-201ENSMUST00000184184 256 ntBASIC6.44□□□□□ -1.38
P20040 Gm27617-201ENSMUST00000184321 168 ntBASIC6.44□□□□□ -1.38
P20040 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
P20040 Gm37689-201ENSMUST00000193139 275 ntBASIC6.44□□□□□ -1.38
P20040 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.44□□□□□ -1.38
P20040 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.44□□□□□ -1.38
P20040 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.44□□□□□ -1.38
P20040 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.44□□□□□ -1.38
P20040 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.44□□□□□ -1.38
P20040 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
P20040 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.44□□□□□ -1.38
P20040 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
P20040 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
P20040 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
P20040 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.44□□□□□ -1.38
P20040 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
P20040 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
P20040 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
P20040 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
P20040 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.43□□□□□ -1.38
P20040 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
P20040 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.43□□□□□ -1.38
P20040 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
P20040 BC085271-201ENSMUST00000191852 1487 ntBASIC6.43□□□□□ -1.38
P20040 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
P20040 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
P20040 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
P20040 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
P20040 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
P20040 Gm13229-201ENSMUST00000118238 340 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms