Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm8010-201ENSMUST00000194128 873 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm45283-201ENSMUST00000210593 628 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm18112-201ENSMUST00000219862 1195 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 AC154760.1-201ENSMUST00000227218 673 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 AC166822.2-201ENSMUST00000228746 275 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Klf5-202ENSMUST00000226784 2852 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Hmgb3O54879 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.86□□□□□ -1.47
Hmgb3O54879 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb3O54879 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm12346-201ENSMUST00000121455 2255 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm13573-201ENSMUST00000116410 631 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm15539-201ENSMUST00000118452 566 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm8172-201ENSMUST00000120762 750 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm12133-201ENSMUST00000121775 661 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm22388-201ENSMUST00000158194 248 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm4868-201ENSMUST00000164138 789 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm10012-202ENSMUST00000170379 372 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm23945-201ENSMUST00000179609 92 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm29739-201ENSMUST00000191760 529 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm33778-201ENSMUST00000216884 704 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm21321-201ENSMUST00000220179 446 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 AC134414.1-201ENSMUST00000228499 1221 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC5.85□□□□□ -1.47
Hmgb3O54879 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Hmgb3O54879 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Hmgb3O54879 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm45088-201ENSMUST00000207066 1408 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC5.84□□□□□ -1.47
Hmgb3O54879 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 Gm4863-201ENSMUST00000196907 1381 ntBASIC5.84□□□□□ -1.47
Hmgb3O54879 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC5.84□□□□□ -1.47
Hmgb3O54879 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms