Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm13731-201ENSMUST00000117332 196 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm11689-201ENSMUST00000120766 302 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm7991-201ENSMUST00000168668 591 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm22690-201ENSMUST00000175054 110 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm27026-201ENSMUST00000183003 892 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm43846-201ENSMUST00000200502 932 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm20900-201ENSMUST00000078729 472 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Ube2nl-201ENSMUST00000085228 456 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm43258-201ENSMUST00000200312 1950 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Foxp3-202ENSMUST00000115738 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 AC164978.1-201ENSMUST00000228608 4011 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Gm28187-201ENSMUST00000186885 2134 ntBASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Tnfrsf10b-201ENSMUST00000022663 3179 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7.45□□□□□ -1.22
Nkx6-1Q99MA9 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm44280-201ENSMUST00000204498 3111 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm13552-201ENSMUST00000118837 417 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm11416-201ENSMUST00000119111 863 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm5759-201ENSMUST00000119203 811 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm5135-201ENSMUST00000121100 573 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm26353-201ENSMUST00000158224 255 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm22687-201ENSMUST00000158301 105 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm17973-201ENSMUST00000174509 520 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm37920-201ENSMUST00000192952 749 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm42857-201ENSMUST00000200823 339 ntBASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC7.44□□□□□ -1.22
Nkx6-1Q99MA9 Gm45299-201ENSMUST00000210199 420 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms