Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Gm2840-201ENSMUST00000048361 411 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Top1mtQ8R4U6 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm11865-201ENSMUST00000118093 859 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm8644-201ENSMUST00000118619 596 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm9697-201ENSMUST00000147052 997 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm3208-201ENSMUST00000168281 427 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Mir8094-201ENSMUST00000183361 117 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm27401-201ENSMUST00000184052 173 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Mir7115-201ENSMUST00000184275 64 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm5147-201ENSMUST00000185999 794 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm37349-201ENSMUST00000194205 624 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm42573-201ENSMUST00000202327 478 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm9800-201ENSMUST00000052615 336 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.59□□□□□ -1.03
Top1mtQ8R4U6 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm23834-201ENSMUST00000104436 129 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm13006-201ENSMUST00000118683 214 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm22119-201ENSMUST00000175594 99 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm27972-201ENSMUST00000184720 137 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm28894-201ENSMUST00000185214 615 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm37369-201ENSMUST00000194179 615 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm44943-201ENSMUST00000207254 300 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm34424-201ENSMUST00000213400 782 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Mif-ps7-201ENSMUST00000223357 327 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 AL844586.1-201ENSMUST00000224297 1042 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Mrpl42-201ENSMUST00000075829 666 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.58□□□□□ -1.04
Top1mtQ8R4U6 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms