Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm6428-201ENSMUST00000161062 345 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm26729-201ENSMUST00000180744 352 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm27218-201ENSMUST00000183745 392 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm37295-201ENSMUST00000192186 109 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm43108-201ENSMUST00000200525 293 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm44380-201ENSMUST00000203125 293 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm18484-201ENSMUST00000204389 991 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm45478-201ENSMUST00000209472 211 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 AC159205.2-201ENSMUST00000223759 816 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim29Q8R2Q0 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm23834-201ENSMUST00000104436 129 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm6746-201ENSMUST00000108774 483 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm11850-201ENSMUST00000119679 479 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm5181-201ENSMUST00000183140 971 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Mir6409-201ENSMUST00000184957 92 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm28416-201ENSMUST00000188334 292 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.3□□□□□ -1.08
Trim29Q8R2Q0 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim29Q8R2Q0 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.29□□□□□ -1.08
Trim29Q8R2Q0 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.29□□□□□ -1.08
Trim29Q8R2Q0 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC8.29□□□□□ -1.08
Trim29Q8R2Q0 AC166574.5-201ENSMUST00000227438 1432 ntBASIC8.29□□□□□ -1.08
Trim29Q8R2Q0 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms