Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Mir763-201ENSMUST00000103249 120 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm13038-201ENSMUST00000119886 459 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm24139-201ENSMUST00000122780 288 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm26407-201ENSMUST00000158504 307 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm7426-201ENSMUST00000179046 404 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm20111-201ENSMUST00000184830 319 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm38022-201ENSMUST00000191762 403 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm9289-201ENSMUST00000221269 606 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.04
Cchcr1Q8K2I2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm45454-201ENSMUST00000211484 455 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm7392-201ENSMUST00000217815 345 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm7986-201ENSMUST00000221336 551 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.53□□□□□ -1.04
Cchcr1Q8K2I2 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Cchcr1Q8K2I2 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.52□□□□□ -1.04
Cchcr1Q8K2I2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cchcr1Q8K2I2 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.52□□□□□ -1.04
Cchcr1Q8K2I2 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Gm22671-201ENSMUST00000104420 134 ntBASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cchcr1Q8K2I2 Gm12124-201ENSMUST00000120504 679 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms