Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Nup88Q8CEC0 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 BC085271-201ENSMUST00000191852 1487 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 AC164437.5-201ENSMUST00000227235 4414 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm26016-201ENSMUST00000104403 129 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm16221-201ENSMUST00000117331 393 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm24893-201ENSMUST00000122745 369 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm27866-201ENSMUST00000184459 171 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm28195-201ENSMUST00000186992 372 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm45198-201ENSMUST00000206796 591 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Nup88Q8CEC0 Gm37410-201ENSMUST00000193623 3039 ntBASIC8.59□□□□□ -1.04
Nup88Q8CEC0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC153152.1-201ENSMUST00000221105 2742 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm16523-201ENSMUST00000121253 592 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm24011-201ENSMUST00000157732 268 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm25180-201ENSMUST00000157746 115 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm18690-201ENSMUST00000204488 985 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC120002.1-201ENSMUST00000218456 331 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC125087.1-201ENSMUST00000227552 514 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.58□□□□□ -1.04
Nup88Q8CEC0 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm11945-201ENSMUST00000120551 476 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Gm25692-201ENSMUST00000175444 125 ntBASIC8.57□□□□□ -1.04
Nup88Q8CEC0 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms