Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.18□□□□□ -1.26
Lrif1Q8CDD9 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.18□□□□□ -1.26
Lrif1Q8CDD9 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Lrif1Q8CDD9 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm22438-201ENSMUST00000104049 132 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm6746-201ENSMUST00000108774 483 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm12365-201ENSMUST00000117931 568 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm11558-201ENSMUST00000118454 459 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm16407-201ENSMUST00000122134 567 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm22670-201ENSMUST00000158724 143 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm28728-201ENSMUST00000189087 405 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm37392-201ENSMUST00000192098 516 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm9723-201ENSMUST00000192100 457 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm6197-201ENSMUST00000192273 454 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm38840-201ENSMUST00000204716 843 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm2089-201ENSMUST00000218294 479 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm7647-201ENSMUST00000200996 1389 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 AC120347.2-201ENSMUST00000222224 2015 ntBASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Lrif1Q8CDD9 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm44797-201ENSMUST00000208780 1837 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm19801-201ENSMUST00000218231 1882 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm24373-201ENSMUST00000104393 132 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm26269-201ENSMUST00000180144 126 ntBASIC7.16□□□□□ -1.26
Lrif1Q8CDD9 Gm5147-201ENSMUST00000185999 794 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms