Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trub1Q8C0D0 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm8276-201ENSMUST00000192231 1812 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm22470-201ENSMUST00000104117 130 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm8812-201ENSMUST00000118496 412 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm23657-201ENSMUST00000122623 294 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm7426-201ENSMUST00000179046 404 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Mir6940-201ENSMUST00000183447 70 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm37349-201ENSMUST00000194205 624 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm45198-201ENSMUST00000206796 591 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm6581-201ENSMUST00000214545 260 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 AV026068-219ENSMUST00000224148 933 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm22504-201ENSMUST00000082963 139 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trub1Q8C0D0 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm13414-201ENSMUST00000117516 727 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm13988-201ENSMUST00000119363 288 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm8916-201ENSMUST00000119732 949 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm11371-201ENSMUST00000120294 385 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm13940-201ENSMUST00000121023 301 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm12297-201ENSMUST00000121380 979 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm27972-201ENSMUST00000184720 137 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm44943-201ENSMUST00000207254 300 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm36758-201ENSMUST00000222594 310 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm18960-201ENSMUST00000222962 713 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm2840-201ENSMUST00000048361 411 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm25852-201ENSMUST00000082790 130 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Trub1Q8C0D0 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trub1Q8C0D0 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms