Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm14212-201ENSMUST00000122023 826 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm23007-201ENSMUST00000158951 177 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm20702-201ENSMUST00000176181 460 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm8925-201ENSMUST00000197212 763 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm18995-201ENSMUST00000202981 520 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 CT572999.1-201ENSMUST00000220315 1260 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm5316-201ENSMUST00000050391 270 ntBASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Ccdc40Q8BI79 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm11895-201ENSMUST00000122165 467 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm22687-201ENSMUST00000158301 105 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm25692-201ENSMUST00000175444 125 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm28239-201ENSMUST00000190225 447 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm38203-201ENSMUST00000191815 245 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm37481-201ENSMUST00000195176 403 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm23604-202ENSMUST00000198428 137 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 AC160635.1-201ENSMUST00000216731 474 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Ccdc40Q8BI79 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms