Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm27782-201ENSMUST00000185059 199 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm3121-201ENSMUST00000187086 406 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm18699-201ENSMUST00000190713 243 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm20690-202ENSMUST00000195126 355 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 AC160338.3-201ENSMUST00000214836 384 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm32899-201ENSMUST00000219694 207 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm26226-201ENSMUST00000082509 116 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm6491-201ENSMUST00000118273 990 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm8662-201ENSMUST00000118644 574 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm8916-201ENSMUST00000119732 949 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm22948-201ENSMUST00000158561 243 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm7341-201ENSMUST00000192183 926 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm38079-201ENSMUST00000195603 154 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm43212-201ENSMUST00000198208 394 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 AC155266.1-201ENSMUST00000220762 904 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm6562-201ENSMUST00000221903 464 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 CT030182.4-201ENSMUST00000223647 645 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Gm11282-201ENSMUST00000119018 1416 ntBASIC8.12□□□□□ -1.11
Usp49Q6P9L4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm43019-201ENSMUST00000196948 2863 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm26967-201ENSMUST00000182878 2303 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm22882-201ENSMUST00000157749 124 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm29496-201ENSMUST00000189854 693 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm44566-201ENSMUST00000207638 304 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm19092-201ENSMUST00000209036 969 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm45359-201ENSMUST00000210635 427 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms