Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne3Q4FZC9 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne3Q4FZC9 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne3Q4FZC9 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
Syne3Q4FZC9 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne3Q4FZC9 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 BC085271-201ENSMUST00000191852 1487 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Mir669e-201ENSMUST00000117003 119 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm13163-201ENSMUST00000119875 336 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Zfp874a-208ENSMUST00000225479 1092 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 AC096628.1-201ENSMUST00000226060 641 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Snora9-201ENSMUST00000082579 133 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm38380-201ENSMUST00000195718 2248 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne3Q4FZC9 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Syne3Q4FZC9 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Syne3Q4FZC9 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm22152-201ENSMUST00000116966 125 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm12931-201ENSMUST00000117046 324 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm19791-201ENSMUST00000180398 859 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm27542-201ENSMUST00000184184 256 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm43555-201ENSMUST00000196588 310 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm18484-201ENSMUST00000204389 991 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm7392-201ENSMUST00000217815 345 ntBASIC7.83□□□□□ -1.16
Syne3Q4FZC9 Gm4803-201ENSMUST00000218729 1279 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms