Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Gm5493-201ENSMUST00000182063 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Gm38147-201ENSMUST00000192397 1798 ntBASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 AC131743.4-201ENSMUST00000221638 1553 ntBASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC9.62□□□□□ -0.87
Usp48Q3V0C5 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.62□□□□□ -0.87
Usp48Q3V0C5 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm6300-201ENSMUST00000192393 1498 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AC122828.2-201ENSMUST00000222511 2880 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm7746-201ENSMUST00000120966 503 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm26401-201ENSMUST00000158502 76 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm7651-201ENSMUST00000173398 901 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm15256-201ENSMUST00000177793 883 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm27026-201ENSMUST00000183003 892 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AC153516.1-201ENSMUST00000217955 779 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm9249-201ENSMUST00000221420 578 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AC154634.2-201ENSMUST00000225983 1184 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm10601-201ENSMUST00000120436 1422 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 CT025639.1-201ENSMUST00000223906 1375 ntBASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Usp48Q3V0C5 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 CU024890.1-201ENSMUST00000221361 2019 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm37995-201ENSMUST00000194958 1714 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm25760-201ENSMUST00000103989 132 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm26419-201ENSMUST00000104272 133 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm13423-201ENSMUST00000117205 888 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm4919-201ENSMUST00000117825 604 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm2288-201ENSMUST00000118560 638 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm13444-201ENSMUST00000119445 522 ntBASIC9.6□□□□□ -0.87
Usp48Q3V0C5 Gm12577-201ENSMUST00000119701 574 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms