Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm28416-201ENSMUST00000188334 292 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm7769-201ENSMUST00000212900 933 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm10126-201ENSMUST00000221732 168 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm37785-201ENSMUST00000195783 2408 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Dennd6a-205ENSMUST00000224378 2424 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm5228-201ENSMUST00000117186 357 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm14200-201ENSMUST00000122256 192 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm25969-201ENSMUST00000157166 132 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm17212-201ENSMUST00000166666 259 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Mir6903-201ENSMUST00000183597 88 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Mir6926-201ENSMUST00000184562 68 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm8101-201ENSMUST00000192796 478 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Mir27a-201ENSMUST00000083510 87 ntBASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Spg11Q3UHA3 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC6.77□□□□□ -1.32
Spg11Q3UHA3 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.32
Spg11Q3UHA3 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
Spg11Q3UHA3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm8250-201ENSMUST00000117398 774 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm13754-201ENSMUST00000120486 998 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm15750-201ENSMUST00000120970 616 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm25603-201ENSMUST00000158361 105 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Mir3572-201ENSMUST00000175549 86 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm3511-201ENSMUST00000199823 204 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm7554-201ENSMUST00000202282 574 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm36501-201ENSMUST00000221857 745 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Lcn2-201ENSMUST00000050785 915 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.77□□□□□ -1.33
Spg11Q3UHA3 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms