Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.84□□□□□ -1.15
NcanP55066 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
NcanP55066 Mir193b-201ENSMUST00000103784 79 ntBASIC7.84□□□□□ -1.15
NcanP55066 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm12955-201ENSMUST00000119689 957 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Gm17137-202ENSMUST00000165729 957 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gm6726-201ENSMUST00000172786 681 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm4617-201ENSMUST00000178993 331 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.84□□□□□ -1.15
NcanP55066 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC7.84□□□□□ -1.15
NcanP55066 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.84□□□□□ -1.15
NcanP55066 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Gm19340-201ENSMUST00000221995 345 ntBASIC7.84□□□□□ -1.15
NcanP55066 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.84□□□□□ -1.15
NcanP55066 Gm10123-201ENSMUST00000075723 490 ntBASIC7.84□□□□□ -1.15
NcanP55066 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC7.84□□□□□ -1.15
NcanP55066 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NcanP55066 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
NcanP55066 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
NcanP55066 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
NcanP55066 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.83□□□□□ -1.16
NcanP55066 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Tyrp1-201ENSMUST00000006151 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
NcanP55066 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NcanP55066 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.83□□□□□ -1.16
NcanP55066 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.83□□□□□ -1.16
NcanP55066 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NcanP55066 Gm14741-201ENSMUST00000120777 1009 ntBASIC7.83□□□□□ -1.16
NcanP55066 Gm15349-201ENSMUST00000121154 204 ntBASIC7.83□□□□□ -1.16
NcanP55066 Gm24065-201ENSMUST00000157487 264 ntBASIC7.83□□□□□ -1.16
NcanP55066 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC7.83□□□□□ -1.16
NcanP55066 Gm7499-201ENSMUST00000210423 813 ntBASIC7.83□□□□□ -1.16
NcanP55066 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC7.83□□□□□ -1.16
NcanP55066 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.83□□□□□ -1.16
NcanP55066 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.83□□□□□ -1.16
NcanP55066 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.83□□□□□ -1.16
NcanP55066 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.83□□□□□ -1.16
NcanP55066 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.83□□□□□ -1.16
NcanP55066 Gm24032-201ENSMUST00000083932 159 ntBASIC7.83□□□□□ -1.16
NcanP55066 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Napg-201ENSMUST00000025474 3562 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
NcanP55066 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.83□□□□□ -1.16
NcanP55066 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Gm43519-201ENSMUST00000197239 1872 ntBASIC7.83□□□□□ -1.16
NcanP55066 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC7.83□□□□□ -1.16
NcanP55066 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NcanP55066 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.83□□□□□ -1.16
NcanP55066 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
NcanP55066 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Gm28322-201ENSMUST00000185627 1475 ntBASIC7.82□□□□□ -1.16
NcanP55066 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm43219-201ENSMUST00000197972 1937 ntBASIC7.82□□□□□ -1.16
NcanP55066 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
NcanP55066 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
NcanP55066 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm22774-201ENSMUST00000102084 109 ntBASIC7.82□□□□□ -1.16
NcanP55066 Gm24272-201ENSMUST00000102329 98 ntBASIC7.82□□□□□ -1.16
NcanP55066 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NcanP55066 Gm23979-201ENSMUST00000104071 128 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms