Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.16□□□□□ -1.1
Brca1P48754 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.16□□□□□ -1.1
Brca1P48754 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.16□□□□□ -1.1
Brca1P48754 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.16□□□□□ -1.1
Brca1P48754 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Brca1P48754 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Smcr8-202ENSMUST00000102667 3544 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Gm23979-201ENSMUST00000104071 128 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Gm12402-201ENSMUST00000120536 334 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Brca1P48754 Mir7037-201ENSMUST00000184414 65 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Gm34768-201ENSMUST00000193884 565 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Gm30517-201ENSMUST00000197350 772 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Brca1P48754 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.15□□□□□ -1.1
Brca1P48754 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Brca1P48754 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Brca1P48754 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Brca1P48754 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Brca1P48754 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 Gm13141-201ENSMUST00000117417 456 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm15048-201ENSMUST00000118201 954 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm7189-201ENSMUST00000119811 429 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm14054-201ENSMUST00000120744 704 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm11879-201ENSMUST00000121885 702 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm10913-201ENSMUST00000133732 463 ntBASIC8.15□□□□□ -1.11
Brca1P48754 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 Gm6921-201ENSMUST00000161478 435 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 Gm44411-201ENSMUST00000204172 349 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm44861-201ENSMUST00000208325 1220 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Gm2774-201ENSMUST00000213650 1165 ntBASIC8.15□□□□□ -1.11
Brca1P48754 CT009713.1-201ENSMUST00000224828 853 ntBASIC8.15□□□□□ -1.11
Brca1P48754 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Brca1P48754 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Brca1P48754 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Brca1P48754 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.14□□□□□ -1.11
Brca1P48754 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC8.14□□□□□ -1.11
Brca1P48754 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Gm37499-201ENSMUST00000194683 3478 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Gm11821-201ENSMUST00000117335 979 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm15765-201ENSMUST00000118407 910 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.14□□□□□ -1.11
Brca1P48754 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Gm16276-201ENSMUST00000131218 262 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC8.14□□□□□ -1.11
Brca1P48754 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Brca1P48754 Gm35108-201ENSMUST00000194321 699 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm33191-201ENSMUST00000195604 699 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm9504-201ENSMUST00000196322 468 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
Brca1P48754 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC8.14□□□□□ -1.11
Brca1P48754 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.14□□□□□ -1.11
Brca1P48754 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.14□□□□□ -1.11
Brca1P48754 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.14□□□□□ -1.11
Brca1P48754 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms