Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Gm44722-201ENSMUST00000206473 436 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm22504-201ENSMUST00000082963 139 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Gm25189-201ENSMUST00000083911 164 ntBASIC8.55□□□□□ -1.04
Traf1P39428 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Traf1P39428 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Traf1P39428 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC8.55□□□□□ -1.04
Traf1P39428 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Traf1P39428 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.54□□□□□ -1.04
Traf1P39428 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm13183-201ENSMUST00000118615 789 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.54□□□□□ -1.04
Traf1P39428 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm9556-201ENSMUST00000182938 940 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm27866-201ENSMUST00000184459 171 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm7341-201ENSMUST00000192183 926 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm7369-201ENSMUST00000192738 936 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.54□□□□□ -1.04
Traf1P39428 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm19007-201ENSMUST00000217746 874 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm19217-201ENSMUST00000218238 328 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.54□□□□□ -1.04
Traf1P39428 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 n-R5s60-201ENSMUST00000083299 119 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Traf1P39428 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.54□□□□□ -1.04
Traf1P39428 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Traf1P39428 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.54□□□□□ -1.04
Traf1P39428 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Traf1P39428 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Traf1P39428 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Gm8421-201ENSMUST00000119439 305 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms