Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC134577.3-201ENSMUST00000226490 3000 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.09
Col2a1P28481 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm38043-201ENSMUST00000195501 5141 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm22642-201ENSMUST00000175352 252 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm19480-201ENSMUST00000185547 667 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.21□□□□□ -1.09
Col2a1P28481 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.21□□□□□ -1.09
Col2a1P28481 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.21□□□□□ -1.09
Col2a1P28481 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.21□□□□□ -1.09
Col2a1P28481 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm24451-201ENSMUST00000083353 133 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.21□□□□□ -1.09
Col2a1P28481 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Col2a1P28481 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col2a1P28481 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col2a1P28481 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col2a1P28481 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Col2a1P28481 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Col2a1P28481 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col2a1P28481 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col2a1P28481 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm25760-201ENSMUST00000103989 132 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm24682-201ENSMUST00000158764 137 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm9672-201ENSMUST00000166437 425 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.2□□□□□ -1.1
Col2a1P28481 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm43849-201ENSMUST00000201086 215 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 AL671874.1-201ENSMUST00000223746 1123 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Snora21-201ENSMUST00000082967 137 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Mir296-201ENSMUST00000083587 79 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col2a1P28481 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.2□□□□□ -1.1
Col2a1P28481 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col2a1P28481 Gm45807-201ENSMUST00000209142 2874 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms