Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm12222-201ENSMUST00000121368 260 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.22□□□□□ -1.25
BdnfP21237 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gm22424-201ENSMUST00000158527 87 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
BdnfP21237 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.22□□□□□ -1.25
BdnfP21237 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm18970-201ENSMUST00000186040 938 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm29161-201ENSMUST00000188250 699 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm37247-201ENSMUST00000192549 730 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm37490-201ENSMUST00000195566 724 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm43044-201ENSMUST00000198091 379 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm2566-201ENSMUST00000201267 431 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm19596-201ENSMUST00000203685 739 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC7.22□□□□□ -1.25
BdnfP21237 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC7.22□□□□□ -1.25
BdnfP21237 Gm2915-201ENSMUST00000222565 787 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.22□□□□□ -1.25
BdnfP21237 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
BdnfP21237 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
BdnfP21237 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.22□□□□□ -1.25
BdnfP21237 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
BdnfP21237 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.21□□□□□ -1.25
BdnfP21237 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.21□□□□□ -1.25
BdnfP21237 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
BdnfP21237 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
BdnfP21237 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
BdnfP21237 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.21□□□□□ -1.25
BdnfP21237 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Gm11474-201ENSMUST00000120814 277 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm13649-201ENSMUST00000122325 606 ntBASIC7.21□□□□□ -1.26
BdnfP21237 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Gm24994-201ENSMUST00000157414 121 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm25372-201ENSMUST00000158161 255 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Mir3078-201ENSMUST00000175231 87 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Mir6974-201ENSMUST00000184381 83 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm17835-201ENSMUST00000196870 499 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm27680-202ENSMUST00000199221 807 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.21□□□□□ -1.26
BdnfP21237 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm19161-201ENSMUST00000217958 737 ntBASIC7.21□□□□□ -1.26
BdnfP21237 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 AC137117.3-201ENSMUST00000226265 485 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
BdnfP21237 Gm10015-201ENSMUST00000072570 465 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
BdnfP21237 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
BdnfP21237 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
BdnfP21237 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.21□□□□□ -1.26
BdnfP21237 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms