Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
Lire1P11260 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.21□□□□□ -1.26
Lire1P11260 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Lire1P11260 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.21□□□□□ -1.26
Lire1P11260 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.21□□□□□ -1.26
Lire1P11260 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
Lire1P11260 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Lire1P11260 Gm40309-201ENSMUST00000202699 1752 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.2□□□□□ -1.26
Lire1P11260 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC7.2□□□□□ -1.26
Lire1P11260 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm6746-201ENSMUST00000108774 483 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm13742-201ENSMUST00000118805 457 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm14053-201ENSMUST00000121662 470 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm22342-201ENSMUST00000122647 298 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm24239-201ENSMUST00000157791 255 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm19815-201ENSMUST00000175818 335 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm18033-201ENSMUST00000186678 550 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm43664-201ENSMUST00000196038 734 ntBASIC7.2□□□□□ -1.26
Lire1P11260 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm42861-201ENSMUST00000199596 634 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm42573-201ENSMUST00000202327 478 ntBASIC7.2□□□□□ -1.26
Lire1P11260 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.2□□□□□ -1.26
Lire1P11260 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Gm6579-201ENSMUST00000208224 865 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC7.2□□□□□ -1.26
Lire1P11260 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC7.2□□□□□ -1.26
Lire1P11260 AC167013.3-201ENSMUST00000228110 989 ntBASIC7.2□□□□□ -1.26
Lire1P11260 AC171241.2-201ENSMUST00000228744 892 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lire1P11260 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lire1P11260 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Lire1P11260 AC164433.1-201ENSMUST00000226138 1544 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
Lire1P11260 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Lire1P11260 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.2□□□□□ -1.26
Lire1P11260 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Lire1P11260 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Lire1P11260 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm15078-201ENSMUST00000118371 782 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm11987-201ENSMUST00000118524 381 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.19□□□□□ -1.26
Lire1P11260 Gm26184-201ENSMUST00000157686 131 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm17138-201ENSMUST00000165702 459 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm2951-201ENSMUST00000169447 490 ntBASIC7.19□□□□□ -1.26
Lire1P11260 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Lire1P11260 Gm22698-201ENSMUST00000175375 108 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms