Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm5841-201ENSMUST00000195307 2177 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm12439-201ENSMUST00000117162 365 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm11501-201ENSMUST00000118039 581 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm4202-201ENSMUST00000169025 733 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm37328-201ENSMUST00000193191 640 ntBASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc180J3QNE4 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm6786-201ENSMUST00000203165 1915 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm42692-201ENSMUST00000199482 2833 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm12653-201ENSMUST00000117778 561 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm6654-201ENSMUST00000118950 348 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm24924-201ENSMUST00000084007 164 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Thada-201ENSMUST00000047524 7884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm20045-201ENSMUST00000192658 5577 ntBASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc180J3QNE4 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm8245-201ENSMUST00000182434 987 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm7804-202ENSMUST00000194187 854 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm42752-201ENSMUST00000198394 1106 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 AC165349.1-201ENSMUST00000217896 424 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 AC174082.2-201ENSMUST00000222094 543 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Gm37161-201ENSMUST00000191994 2697 ntBASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc180J3QNE4 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm26528-201ENSMUST00000181965 283 ntBASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm38068-201ENSMUST00000192546 540 ntBASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc180J3QNE4 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 CT025619.3-201ENSMUST00000216299 3267 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm25093-201ENSMUST00000103993 132 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm14746-201ENSMUST00000120309 741 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm24286-201ENSMUST00000157632 128 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm37295-201ENSMUST00000192186 109 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 AC122844.1-201ENSMUST00000195971 107 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm1969-201ENSMUST00000198125 1220 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms