Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.9□□□□□ -0.83
Tmf1B9EKI3 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.9□□□□□ -0.83
Tmf1B9EKI3 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Tmf1B9EKI3 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm44769-201ENSMUST00000206120 2809 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm10259-201ENSMUST00000091289 1590 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm12944-201ENSMUST00000119262 463 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm12321-201ENSMUST00000121485 804 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm7244-201ENSMUST00000164658 455 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Mir6357-201ENSMUST00000184246 104 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm29354-201ENSMUST00000187613 696 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm18875-201ENSMUST00000188563 882 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm29369-201ENSMUST00000190674 615 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm38177-201ENSMUST00000192213 1040 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm8101-201ENSMUST00000192796 478 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm8168-201ENSMUST00000209631 948 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm7986-201ENSMUST00000221336 551 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm37510-201ENSMUST00000194151 4762 ntBASIC9.89□□□□□ -0.83
Tmf1B9EKI3 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Tmf1B9EKI3 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm19801-201ENSMUST00000218231 1882 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm15203-201ENSMUST00000117668 455 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm13486-201ENSMUST00000119910 282 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm11653-201ENSMUST00000119992 1009 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Zfp572-202ENSMUST00000184208 1078 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm44471-201ENSMUST00000197963 100 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 CT009556.4-201ENSMUST00000227092 200 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 AC121997.2-202ENSMUST00000227158 939 ntBASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Tmf1B9EKI3 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Tmf1B9EKI3 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms