Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Trav9n-1-201ENSMUST00000185224 339 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm18301-201ENSMUST00000185261 888 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm2324-201ENSMUST00000187464 662 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm20936-201ENSMUST00000191049 658 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Ighv1-10-201ENSMUST00000194372 355 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm6308-201ENSMUST00000203226 313 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm44917-201ENSMUST00000208798 520 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm45401-201ENSMUST00000209456 733 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm18860-201ENSMUST00000212029 764 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm8637-201ENSMUST00000212919 1085 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC132384.2-201ENSMUST00000218018 526 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC140264.1-201ENSMUST00000220023 469 ntTSL 3 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm33263-201ENSMUST00000220371 459 ntTSL 2 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm33312-201ENSMUST00000222443 332 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm9973-205ENSMUST00000223449 849 ntTSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Tssk4-203ENSMUST00000226497 1235 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Tssk4-206ENSMUST00000228041 1217 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC154627.1-201ENSMUST00000228799 1286 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm9873-201ENSMUST00000063891 1097 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC155167.2-201ENSMUST00000226127 1945 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 AC159196.3-201ENSMUST00000224307 1841 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Fam35a-206ENSMUST00000228626 3100 ntBASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm19337-201ENSMUST00000218100 1584 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm45832-201ENSMUST00000212762 1443 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 CT009757.4-201ENSMUST00000221520 2541 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Mir708-201ENSMUST00000102189 109 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm24933-201ENSMUST00000103762 110 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm23252-201ENSMUST00000103776 110 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Rnu11-201ENSMUST00000104135 134 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm25502-201ENSMUST00000104428 131 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm12460-201ENSMUST00000117147 357 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm14274-201ENSMUST00000117182 615 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm5228-201ENSMUST00000117186 357 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm14639-201ENSMUST00000120850 866 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm14633-201ENSMUST00000121152 470 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm14323-201ENSMUST00000122418 627 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 4930528P14Rik-201ENSMUST00000152815 509 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm16570-201ENSMUST00000161951 436 ntBASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Gm3880A0A1B0GSB3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms