Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm42490-201ENSMUST00000198595 2064 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Mir688-201ENSMUST00000102055 75 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm11926-201ENSMUST00000118520 430 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm16418-201ENSMUST00000118577 171 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm13940-201ENSMUST00000121023 301 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm13776-201ENSMUST00000122236 1261 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm25178-201ENSMUST00000122633 325 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm23392-201ENSMUST00000157580 113 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm16026-205ENSMUST00000162923 641 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm27617-201ENSMUST00000184321 168 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Mir6972-201ENSMUST00000184774 64 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm38022-201ENSMUST00000191762 403 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm37260-201ENSMUST00000193748 1251 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm44979-201ENSMUST00000206218 287 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Upk3aQ9JKX8 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm22671-201ENSMUST00000104420 134 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm8812-201ENSMUST00000118496 412 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm13463-201ENSMUST00000119020 233 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm12321-201ENSMUST00000121485 804 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm22275-201ENSMUST00000122470 310 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm26357-201ENSMUST00000158218 115 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm21182-201ENSMUST00000178899 794 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm7426-201ENSMUST00000179046 404 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm7481-201ENSMUST00000182020 995 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm29354-201ENSMUST00000187613 696 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm6472-202ENSMUST00000187973 582 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm43656-201ENSMUST00000197882 434 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm8921-201ENSMUST00000204306 649 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm44943-201ENSMUST00000207254 300 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm6667-201ENSMUST00000217169 564 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm4796-201ENSMUST00000219802 624 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm17611-202ENSMUST00000220613 814 ntBASIC6.98□□□□□ -1.29
Upk3aQ9JKX8 Gm36758-201ENSMUST00000222594 310 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms