Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm38261-201ENSMUST00000192608 316 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 BC085271-202ENSMUST00000195236 867 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm43487-201ENSMUST00000200331 1031 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm44961-201ENSMUST00000207450 196 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm32220-201ENSMUST00000218420 298 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm19688-201ENSMUST00000218652 424 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC144783.1-201ENSMUST00000219103 960 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm7695-201ENSMUST00000220900 641 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC192333.4-201ENSMUST00000224269 981 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm24150-201ENSMUST00000082759 104 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Snora61-201ENSMUST00000083015 130 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm4149-201ENSMUST00000099371 276 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Olfr1043-201ENSMUST00000099907 945 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm10364-201ENSMUST00000076633 1328 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Apex2-206ENSMUST00000112727 1663 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.7□□□□□ -1.18
Trim39Q9ESN2 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim39Q9ESN2 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm37150-201ENSMUST00000193900 2754 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm44800-201ENSMUST00000207510 1855 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Mir675-201ENSMUST00000102320 84 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm24374-201ENSMUST00000104394 106 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm13925-201ENSMUST00000117315 243 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm13243-201ENSMUST00000117481 565 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Psph-202ENSMUST00000118268 785 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm6491-201ENSMUST00000118273 990 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm13005-201ENSMUST00000119518 585 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm13240-201ENSMUST00000120042 565 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm14911-201ENSMUST00000120803 989 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm24198-201ENSMUST00000157812 108 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm25839-201ENSMUST00000158921 103 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm9476-201ENSMUST00000179109 696 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm20587-201ENSMUST00000186367 1186 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm37581-201ENSMUST00000192371 988 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms