Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm12870-201ENSMUST00000121383 1016 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm11954-201ENSMUST00000121403 349 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm14903-201ENSMUST00000122435 537 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm5834-201ENSMUST00000126680 1026 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm9498-201ENSMUST00000140849 291 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm22339-201ENSMUST00000157718 62 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Mir8110-201ENSMUST00000183771 97 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm17953-201ENSMUST00000192061 667 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm43090-201ENSMUST00000202459 314 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 AC124715.2-201ENSMUST00000226762 617 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 AC118250.1-201ENSMUST00000228569 875 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm6369-201ENSMUST00000069626 412 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm7493-201ENSMUST00000085919 626 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Mir463-201ENSMUST00000093570 75 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm37735-201ENSMUST00000193995 1406 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Gm37303-201ENSMUST00000194202 1559 ntBASIC9.62□□□□□ -0.87
Ube3bQ9ES34 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ube3bQ9ES34 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm28791-201ENSMUST00000185888 1779 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm24071-201ENSMUST00000104520 132 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm23529-201ENSMUST00000104562 132 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm12838-201ENSMUST00000116278 325 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm12611-201ENSMUST00000119452 1037 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm15836-201ENSMUST00000119952 793 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm16103-201ENSMUST00000163003 1279 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm26092-201ENSMUST00000179798 97 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mir669a-1-201ENSMUST00000180238 97 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm8919-201ENSMUST00000182028 1014 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mir7115-201ENSMUST00000184275 64 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm28489-201ENSMUST00000186655 316 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mir1897-202ENSMUST00000198006 79 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm18691-201ENSMUST00000203593 872 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm4270-201ENSMUST00000209666 406 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 AC130547.1-201ENSMUST00000228079 1047 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ube3bQ9ES34 Olfr888-201ENSMUST00000075228 945 ntBASIC9.61□□□□□ -0.87
Ube3bQ9ES34 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms