Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm13552-201ENSMUST00000118837 417 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm13921-201ENSMUST00000119411 463 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm11955-201ENSMUST00000119801 470 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm13586-201ENSMUST00000121784 464 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm24782-201ENSMUST00000157641 132 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm22206-201ENSMUST00000158612 116 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm10012-202ENSMUST00000170379 372 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm20111-201ENSMUST00000184830 319 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Ighv5-5-201ENSMUST00000193826 329 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm43840-201ENSMUST00000199444 484 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm37980-201ENSMUST00000194420 1910 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 AC138284.1-201ENSMUST00000214258 3236 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm24195-201ENSMUST00000116804 137 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm5283-201ENSMUST00000177874 334 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm5698-201ENSMUST00000178317 724 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Mir6340-201ENSMUST00000183857 119 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm27596-201ENSMUST00000185061 83 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Ighv1-30-201ENSMUST00000194082 349 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm42464-201ENSMUST00000196717 417 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Olfr471-201ENSMUST00000210091 936 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm19007-201ENSMUST00000217746 874 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.23□□□□□ -1.09
Smc1aQ9CU62 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Smc1aQ9CU62 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms