Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm15913-201ENSMUST00000118492 331 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm12967-201ENSMUST00000122147 289 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm10086-201ENSMUST00000136334 354 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm23740-201ENSMUST00000157385 100 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Mir1968-201ENSMUST00000157429 68 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Mir7669-201ENSMUST00000183442 58 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm8870-201ENSMUST00000188170 775 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm17965-201ENSMUST00000193904 517 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm38063-201ENSMUST00000193990 342 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm43815-201ENSMUST00000197676 990 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Krt88Q9CPR6 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Krt88Q9CPR6 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
Krt88Q9CPR6 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm24334-201ENSMUST00000104210 128 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm4781-201ENSMUST00000167995 781 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm4891-201ENSMUST00000182279 912 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Mir6340-201ENSMUST00000183857 119 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm43805-201ENSMUST00000198488 824 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AL844586.1-201ENSMUST00000224297 1042 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm6767-201ENSMUST00000118650 1381 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm4863-201ENSMUST00000196907 1381 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gm7647-201ENSMUST00000200996 1389 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Krt88Q9CPR6 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms