Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm19161-201ENSMUST00000217958 737 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm19095-201ENSMUST00000220533 730 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 AC173345.3-201ENSMUST00000221245 1093 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim8Q99PJ2 Gm37525-201ENSMUST00000193499 2871 ntBASIC7.38□□□□□ -1.23
Trim8Q99PJ2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm12985-201ENSMUST00000118376 183 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm11416-201ENSMUST00000119111 863 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm11474-201ENSMUST00000120814 277 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm23673-201ENSMUST00000157474 298 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm22424-201ENSMUST00000158527 87 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm24465-201ENSMUST00000178398 107 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm7678-201ENSMUST00000181879 943 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm10925-201ENSMUST00000189941 678 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm38280-201ENSMUST00000192610 158 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 4930448I18Rik-201ENSMUST00000197958 736 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm43906-201ENSMUST00000203194 906 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm18944-201ENSMUST00000207672 643 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm45283-201ENSMUST00000210593 628 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 AC107663.2-201ENSMUST00000225534 1234 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Gm14373-201ENSMUST00000122467 2158 ntBASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim8Q99PJ2 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm4863-201ENSMUST00000196907 1381 ntBASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim8Q99PJ2 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms