Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Mir669e-201ENSMUST00000117003 119 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm5752-201ENSMUST00000117771 594 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm5255-201ENSMUST00000120125 642 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Mir1962-201ENSMUST00000157516 121 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Zfp572-202ENSMUST00000184208 1078 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm8304-201ENSMUST00000185744 584 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm28239-201ENSMUST00000190225 447 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm38078-201ENSMUST00000192771 392 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 AC137678.1-201ENSMUST00000198370 118 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm7542-201ENSMUST00000201140 777 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm44833-201ENSMUST00000208368 331 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm45446-201ENSMUST00000209348 216 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 CT572999.1-201ENSMUST00000220315 1260 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Olfr890-201ENSMUST00000079804 945 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm37483-201ENSMUST00000194382 1484 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm37790-201ENSMUST00000193136 3346 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm38322-201ENSMUST00000194074 2300 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm38077-201ENSMUST00000193657 3245 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm25437-201ENSMUST00000158282 132 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm23117-201ENSMUST00000158482 108 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm25692-201ENSMUST00000175444 125 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Mir8095-201ENSMUST00000185103 129 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm4545-201ENSMUST00000190797 603 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.19□□□□□ -1.1
Ccdc38Q8CDN8 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm37925-201ENSMUST00000195352 4255 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm46199-201ENSMUST00000220373 1693 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.18□□□□□ -1.1
Ccdc38Q8CDN8 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms