Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm15538-201ENSMUST00000121410 313 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm7426-201ENSMUST00000179046 404 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm27596-201ENSMUST00000185061 83 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm37328-201ENSMUST00000193191 640 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm45319-201ENSMUST00000210220 318 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm19217-201ENSMUST00000218238 328 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 AC158988.1-201ENSMUST00000226731 2624 ntBASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Atg4aQ8C9S8 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 AC129308.1-201ENSMUST00000223800 2309 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm13006-201ENSMUST00000118683 214 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm11257-201ENSMUST00000121313 315 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm36935-201ENSMUST00000192526 292 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm18428-201ENSMUST00000194986 791 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm34424-201ENSMUST00000213400 782 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm9800-201ENSMUST00000052615 336 ntBASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.75□□□□□ -1.01
Atg4aQ8C9S8 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.74□□□□□ -1.01
Atg4aQ8C9S8 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms