Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12593-201ENSMUST00000120981 743 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 BC002163-201ENSMUST00000121906 319 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm2951-201ENSMUST00000169447 490 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm7763-201ENSMUST00000182220 1006 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm19175-201ENSMUST00000199895 916 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm21461-201ENSMUST00000200382 863 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC134414.1-201ENSMUST00000228499 1221 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Ccdc40Q8BI79 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm16221-201ENSMUST00000117331 393 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm14891-201ENSMUST00000117378 596 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm13858-201ENSMUST00000118862 671 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm12632-201ENSMUST00000121223 495 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm22342-201ENSMUST00000122647 298 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm27542-201ENSMUST00000184184 256 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm7436-201ENSMUST00000187229 391 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm8004-201ENSMUST00000187782 617 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm33778-201ENSMUST00000216884 704 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm5948-201ENSMUST00000219627 839 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 AC102689.1-201ENSMUST00000220511 1090 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 AC129017.2-201ENSMUST00000226118 1284 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm25926-201ENSMUST00000082899 160 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Ccdc40Q8BI79 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms