Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm7560-201ENSMUST00000187748 873 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm18058-201ENSMUST00000207385 492 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 AC163038.1-201ENSMUST00000223632 1142 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 AC123058.1-201ENSMUST00000223748 437 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 AC156574.1-201ENSMUST00000227084 452 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.79□□□□□ -1.16
CtifQ6PEE2 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CtifQ6PEE2 Gm44509-201ENSMUST00000205400 1324 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm14036-201ENSMUST00000118248 480 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm14584-201ENSMUST00000118956 637 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm12993-201ENSMUST00000119900 479 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm17157-201ENSMUST00000172397 348 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm8877-201ENSMUST00000172657 655 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm37929-201ENSMUST00000195116 493 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm2767-201ENSMUST00000209582 473 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 AL603745.1-201ENSMUST00000215473 532 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 AV026068-218ENSMUST00000223980 575 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Olfr120-201ENSMUST00000077498 993 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 n-R5s28-201ENSMUST00000082814 119 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm26130-201ENSMUST00000083171 138 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Gm44286-201ENSMUST00000204098 1487 ntBASIC7.78□□□□□ -1.16
CtifQ6PEE2 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CtifQ6PEE2 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CtifQ6PEE2 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm26209-201ENSMUST00000103852 110 ntBASIC7.77□□□□□ -1.17
CtifQ6PEE2 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm13576-201ENSMUST00000120851 778 ntBASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm12477-201ENSMUST00000121221 571 ntBASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC7.77□□□□□ -1.17
CtifQ6PEE2 Gm26351-201ENSMUST00000157532 232 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms