Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm44979-201ENSMUST00000206218 287 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm44760-201ENSMUST00000206375 1173 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 AV026068-229ENSMUST00000225516 595 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp49Q6P9L4 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.15□□□□□ -1.11
Usp49Q6P9L4 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm15160-201ENSMUST00000120553 907 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm26587-201ENSMUST00000180795 989 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm37322-201ENSMUST00000193409 337 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm44892-201ENSMUST00000208595 488 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm24924-201ENSMUST00000084007 164 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm36527-201ENSMUST00000195500 3029 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.14□□□□□ -1.11
Usp49Q6P9L4 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 AC122426.2-201ENSMUST00000216522 2947 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm15778-201ENSMUST00000118469 608 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm13038-201ENSMUST00000119886 459 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm13877-201ENSMUST00000120614 417 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm26357-201ENSMUST00000158218 115 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm16027-201ENSMUST00000161618 758 ntBASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp49Q6P9L4 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms