Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm37842-201ENSMUST00000192330 1569 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm38135-201ENSMUST00000195068 502 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm38021-201ENSMUST00000195687 1560 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm43246-201ENSMUST00000197597 564 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm9364-201ENSMUST00000199220 460 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm42895-201ENSMUST00000200761 2996 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm17834-201ENSMUST00000204322 891 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr170-202ENSMUST00000206562 1417 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm35934-201ENSMUST00000213002 2494 ntTSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm3953-201ENSMUST00000213963 789 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm18783-201ENSMUST00000220465 1151 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 CT025548.2-202ENSMUST00000226598 710 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 AC122858.2-201ENSMUST00000228571 1362 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 AC158519.1-201ENSMUST00000228615 179 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Ciart-201ENSMUST00000036418 1398 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Ypel5-201ENSMUST00000045174 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Tmem202-201ENSMUST00000055345 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Hps1-202ENSMUST00000069298 3196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm23628-201ENSMUST00000082464 173 ntBASIC6.63□□□□□ -1.35
Foxc1Q61572 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 B930095G15Rik-201ENSMUST00000130256 4715 ntTSL 2 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Ddx39-206ENSMUST00000172396 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm26672-202ENSMUST00000180931 3602 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Hnrnpk-201ENSMUST00000043269 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Foxc1Q61572 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Foxc1Q61572 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 4930433I11Rik-201ENSMUST00000171664 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Ddb2-202ENSMUST00000111352 2228 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Smok3b-202ENSMUST00000166206 2160 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Zfp354b-203ENSMUST00000164280 1806 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 5930403N24Rik-203ENSMUST00000191067 1791 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm12608-201ENSMUST00000122013 1715 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 A530021J07Rik-205ENSMUST00000208699 1717 ntTSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 4931428F04Rik-205ENSMUST00000212922 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm8603-201ENSMUST00000115649 1515 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Aoc1-204ENSMUST00000167529 2734 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm24273-201ENSMUST00000102332 164 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Igkv4-55-201ENSMUST00000103359 379 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm24607-201ENSMUST00000104373 133 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm11869-201ENSMUST00000118701 329 ntBASIC6.62□□□□□ -1.35
Foxc1Q61572 Gm15363-201ENSMUST00000118897 631 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 162 ms