Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm33096-201ENSMUST00000210189 493 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm4898-201ENSMUST00000218519 832 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm40853-201ENSMUST00000221342 582 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 CT030170.6-202ENSMUST00000223186 544 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm9255-201ENSMUST00000223225 581 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 AC129537.1-202ENSMUST00000226619 430 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm6807-201ENSMUST00000077435 888 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm45251-201ENSMUST00000209486 1465 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.73□□□□□ -1.17
Trim43aQ3TL54 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim43aQ3TL54 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm7091-201ENSMUST00000116438 586 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm15913-201ENSMUST00000118492 331 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm15049-201ENSMUST00000120474 463 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm11688-201ENSMUST00000122145 308 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Traj54-201ENSMUST00000165071 54 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm5445-201ENSMUST00000180224 480 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm7436-201ENSMUST00000187229 391 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm9451-201ENSMUST00000188491 604 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm43542-201ENSMUST00000199505 379 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm42558-201ENSMUST00000200982 265 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm5586-201ENSMUST00000206264 795 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm18243-201ENSMUST00000220756 887 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Trim43aQ3TL54 AC159002.2-201ENSMUST00000228843 4874 ntBASIC7.72□□□□□ -1.17
Trim43aQ3TL54 Gm38262-201ENSMUST00000194760 1382 ntBASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 AC156636.1-201ENSMUST00000218639 2229 ntBASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Trim43aQ3TL54 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim43aQ3TL54 Gm13282-201ENSMUST00000121577 545 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms