Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 9330162B11Rik-201ENSMUST00000195397 2212 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm23835-201ENSMUST00000104439 132 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm7821-201ENSMUST00000117111 788 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm14356-201ENSMUST00000118322 869 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm15274-201ENSMUST00000131442 291 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm16363-201ENSMUST00000132460 877 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm21979-201ENSMUST00000139887 291 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm15259-201ENSMUST00000151262 291 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Vmn2r-ps87-201ENSMUST00000174393 876 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm17973-201ENSMUST00000174509 520 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm8266-201ENSMUST00000179745 1192 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm29464-201ENSMUST00000187692 513 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm6472-202ENSMUST00000187973 582 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Cnn3-203ENSMUST00000197135 1242 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm42509-201ENSMUST00000197390 781 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm43036-201ENSMUST00000200594 373 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm43895-201ENSMUST00000203219 855 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm44232-201ENSMUST00000204537 225 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm7394-201ENSMUST00000209138 1032 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm45394-201ENSMUST00000209240 1175 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.71□□□□□ -1.34
Col8a1Q00780 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm18789-201ENSMUST00000216115 550 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Col8a1Q00780 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 AC167977.2-201ENSMUST00000225676 682 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Mir135b-201ENSMUST00000083501 97 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Mir185-201ENSMUST00000083530 65 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Fshb-201ENSMUST00000028533 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm44883-201ENSMUST00000206063 3258 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm37673-201ENSMUST00000194880 2451 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gucy1b3-204ENSMUST00000193597 3171 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Gm37200-201ENSMUST00000193689 2172 ntBASIC6.71□□□□□ -1.34
Col8a1Q00780 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col8a1Q00780 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Col8a1Q00780 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm43178-201ENSMUST00000197257 1386 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gas8-203ENSMUST00000212923 3469 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm25276-201ENSMUST00000104300 124 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm13552-201ENSMUST00000118837 417 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm12944-201ENSMUST00000119262 463 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm12687-201ENSMUST00000119752 706 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm14728-201ENSMUST00000122196 492 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Col8a1Q00780 Gm17043-201ENSMUST00000164621 1283 ntBASIC6.7□□□□□ -1.34
Col8a1Q00780 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms