Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm22728-201ENSMUST00000158087 129 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC9.28□□□□□ -0.92
Msh6P54276 Mir7046-201ENSMUST00000183435 66 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm28416-201ENSMUST00000188334 292 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm28070-201ENSMUST00000191502 445 ntBASIC9.28□□□□□ -0.92
Msh6P54276 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Gm44374-201ENSMUST00000199821 140 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Gm18469-201ENSMUST00000208850 439 ntBASIC9.28□□□□□ -0.92
Msh6P54276 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC9.28□□□□□ -0.92
Msh6P54276 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.28□□□□□ -0.92
Msh6P54276 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 CT030185.2-201ENSMUST00000222614 1310 ntBASIC9.28□□□□□ -0.92
Msh6P54276 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Msh6P54276 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Msh6P54276 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Msh6P54276 CR974429.2-201ENSMUST00000221883 1696 ntBASIC9.27□□□□□ -0.92
Msh6P54276 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC9.27□□□□□ -0.92
Msh6P54276 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Msh6P54276 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Msh6P54276 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm26183-201ENSMUST00000157685 139 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm7289-201ENSMUST00000168993 734 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Gm28801-201ENSMUST00000188761 449 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Gm37295-201ENSMUST00000192186 109 ntBASIC9.27□□□□□ -0.93
Msh6P54276 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm44971-201ENSMUST00000206192 337 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Gm7351-201ENSMUST00000210745 580 ntBASIC9.27□□□□□ -0.93
Msh6P54276 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm46424-201ENSMUST00000221567 168 ntBASIC9.27□□□□□ -0.93
Msh6P54276 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Msh6P54276 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm43533-201ENSMUST00000202933 2936 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Gm6327-201ENSMUST00000171185 1335 ntBASIC9.27□□□□□ -0.93
Msh6P54276 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Msh6P54276 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC9.27□□□□□ -0.93
Msh6P54276 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Msh6P54276 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Msh6P54276 Gm20749-201ENSMUST00000186319 3492 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Gm2709-201ENSMUST00000142979 350 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC9.26□□□□□ -0.93
Msh6P54276 Gm3344-201ENSMUST00000169610 603 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Msh6P54276 Gm43656-201ENSMUST00000197882 434 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Gm1969-201ENSMUST00000198125 1220 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Gm4860-201ENSMUST00000200368 454 ntBASIC9.26□□□□□ -0.93
Msh6P54276 AC099934.1-201ENSMUST00000200493 79 ntBASIC9.26□□□□□ -0.93
Msh6P54276 Gm45394-201ENSMUST00000209240 1175 ntBASIC9.26□□□□□ -0.93
Msh6P54276 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC9.26□□□□□ -0.93
Msh6P54276 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC9.26□□□□□ -0.93
Msh6P54276 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Msh6P54276 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.26□□□□□ -0.93
Msh6P54276 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Msh6P54276 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Msh6P54276 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms