Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm2505-201ENSMUST00000200413 825 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm43090-201ENSMUST00000202459 314 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm44571-201ENSMUST00000208092 533 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm45299-201ENSMUST00000210199 420 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm18591-201ENSMUST00000220568 763 ntBASIC8.1□□□□□ -1.11
Sox1P53783 AC164297.5-201ENSMUST00000224365 198 ntBASIC8.1□□□□□ -1.11
Sox1P53783 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Mir185-201ENSMUST00000083530 65 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sox1P53783 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC8.1□□□□□ -1.11
Sox1P53783 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Pde10a-203ENSMUST00000115708 2471 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.1□□□□□ -1.11
Sox1P53783 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.1□□□□□ -1.11
Sox1P53783 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sox1P53783 Sp1-202ENSMUST00000163709 3134 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Cntrob-201ENSMUST00000092973 3861 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Zfp667-205ENSMUST00000170776 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm23437-201ENSMUST00000104036 127 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm23835-201ENSMUST00000104439 132 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm11903-201ENSMUST00000118958 727 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm14463-201ENSMUST00000121117 498 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm24532-201ENSMUST00000157951 286 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm26487-201ENSMUST00000158022 94 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm26607-201ENSMUST00000180661 867 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC8.09□□□□□ -1.11
Sox1P53783 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm6680-201ENSMUST00000192789 950 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm37438-201ENSMUST00000192813 393 ntBASIC8.09□□□□□ -1.11
Sox1P53783 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm43245-201ENSMUST00000197603 468 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm18747-201ENSMUST00000198129 648 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm18765-201ENSMUST00000203166 660 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sox1P53783 Gm45100-201ENSMUST00000209153 391 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm45382-201ENSMUST00000210607 151 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm45551-201ENSMUST00000211459 928 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC8.09□□□□□ -1.11
Sox1P53783 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC8.09□□□□□ -1.11
Sox1P53783 Gm40853-201ENSMUST00000221342 582 ntBASIC8.09□□□□□ -1.11
Sox1P53783 Gm9255-201ENSMUST00000223225 581 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms