Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm42515-201ENSMUST00000199936 3583 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm23748-201ENSMUST00000104227 131 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm12573-201ENSMUST00000118158 286 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm13196-201ENSMUST00000118297 379 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm5166-201ENSMUST00000121332 573 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm23187-201ENSMUST00000175746 86 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Mir7072-201ENSMUST00000184542 60 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm18980-201ENSMUST00000199098 1079 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm44538-201ENSMUST00000205615 348 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 AC127242.3-201ENSMUST00000222009 580 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 AC165157.1-201ENSMUST00000222981 580 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 AC113031.6-202ENSMUST00000228468 1145 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Ednra-201ENSMUST00000034029 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm45635-201ENSMUST00000211516 2134 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm43339-201ENSMUST00000200032 1606 ntBASIC7.6□□□□□ -1.19
Cxcl12P40224 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cxcl12P40224 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm4853-201ENSMUST00000119359 394 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm15081-201ENSMUST00000119794 844 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm25782-201ENSMUST00000122526 289 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm25969-201ENSMUST00000157166 132 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm25117-201ENSMUST00000157194 144 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm25395-201ENSMUST00000157343 272 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm22518-201ENSMUST00000158267 68 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm8245-201ENSMUST00000182434 987 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm27804-201ENSMUST00000185135 119 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm28801-201ENSMUST00000188761 449 ntBASIC7.59□□□□□ -1.19
Cxcl12P40224 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cxcl12P40224 Gm44342-201ENSMUST00000196874 129 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms