Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm22660-201ENSMUST00000104193 130 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm23946-201ENSMUST00000104423 197 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm24071-201ENSMUST00000104520 132 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm12851-201ENSMUST00000117920 421 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm13680-201ENSMUST00000119790 793 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm15836-201ENSMUST00000119952 793 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm11688-201ENSMUST00000122145 308 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.87□□□□□ -1.15
Usp4P35123 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm22342-201ENSMUST00000122647 298 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm23663-201ENSMUST00000158045 80 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm23116-201ENSMUST00000158481 67 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm3307-201ENSMUST00000176164 632 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Usp4P35123 Mir7058-201ENSMUST00000184637 75 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm8004-201ENSMUST00000187782 617 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Gm43108-201ENSMUST00000200525 293 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm44380-201ENSMUST00000203125 293 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm5418-201ENSMUST00000206932 528 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm9289-201ENSMUST00000221269 606 ntBASIC7.87□□□□□ -1.15
Usp4P35123 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.87□□□□□ -1.15
Usp4P35123 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.87□□□□□ -1.15
Usp4P35123 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Usp4P35123 Gm24143-201ENSMUST00000082633 145 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm24046-201ENSMUST00000083111 165 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Usp4P35123 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Gm43158-201ENSMUST00000198484 1555 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC7.87□□□□□ -1.15
Usp4P35123 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.87□□□□□ -1.15
Usp4P35123 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Usp4P35123 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.86□□□□□ -1.15
Usp4P35123 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.86□□□□□ -1.15
Usp4P35123 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp4P35123 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Usp4P35123 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Usp4P35123 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.86□□□□□ -1.15
Usp4P35123 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp4P35123 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Usp4P35123 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Usp4P35123 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.86□□□□□ -1.15
Usp4P35123 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Gm12931-201ENSMUST00000117046 324 ntBASIC7.86□□□□□ -1.15
Usp4P35123 Gm5228-201ENSMUST00000117186 357 ntBASIC7.86□□□□□ -1.15
Usp4P35123 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Gm21990-201ENSMUST00000124692 383 ntBASIC7.86□□□□□ -1.15
Usp4P35123 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Usp4P35123 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms