Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm7289-201ENSMUST00000168993 734 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm43212-201ENSMUST00000198208 394 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC8.24□□□□□ -1.09
Col2a1P28481 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Gm45782-201ENSMUST00000212670 366 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Gm7986-201ENSMUST00000221336 551 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.24□□□□□ -1.09
Col2a1P28481 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 n-R5s217-201ENSMUST00000083341 116 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Mbnl2-203ENSMUST00000226800 3328 ntBASIC8.24□□□□□ -1.09
Col2a1P28481 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col2a1P28481 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm45407-201ENSMUST00000209499 3676 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col2a1P28481 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm13141-201ENSMUST00000117417 456 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm15310-201ENSMUST00000117891 372 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm14847-201ENSMUST00000121978 519 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm27186-201ENSMUST00000184223 307 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm42580-201ENSMUST00000197223 753 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm5711-201ENSMUST00000197896 421 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.23□□□□□ -1.09
Col2a1P28481 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.23□□□□□ -1.09
Col2a1P28481 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.23□□□□□ -1.09
Col2a1P28481 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col2a1P28481 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col2a1P28481 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.23□□□□□ -1.09
Col2a1P28481 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.23□□□□□ -1.09
Col2a1P28481 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col2a1P28481 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Col2a1P28481 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col2a1P28481 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm6679-201ENSMUST00000191467 1869 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Gucy2c-202ENSMUST00000078095 3863 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm13156-201ENSMUST00000118348 321 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Gm14202-201ENSMUST00000120121 311 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Gm12175-201ENSMUST00000122081 345 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Col2a1P28481 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm29156-201ENSMUST00000187764 499 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 AC124395.1-201ENSMUST00000225940 707 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col2a1P28481 Mir7b-201ENSMUST00000083557 111 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Gm16020-201ENSMUST00000084281 210 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Col2a1P28481 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.22□□□□□ -1.09
Col2a1P28481 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Col2a1P28481 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms