Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.48□□□□□ -1.37
P20040 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm29562-201ENSMUST00000190113 904 ntBASIC6.48□□□□□ -1.37
P20040 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC6.48□□□□□ -1.37
P20040 Gm37585-201ENSMUST00000195440 280 ntBASIC6.48□□□□□ -1.37
P20040 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.48□□□□□ -1.37
P20040 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.48□□□□□ -1.37
P20040 Gm18484-201ENSMUST00000204389 991 ntBASIC6.48□□□□□ -1.37
P20040 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.48□□□□□ -1.37
P20040 Gm33778-201ENSMUST00000216884 704 ntBASIC6.48□□□□□ -1.37
P20040 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.48□□□□□ -1.37
P20040 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.48□□□□□ -1.37
P20040 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.48□□□□□ -1.37
P20040 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.48□□□□□ -1.37
P20040 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
P20040 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.48□□□□□ -1.37
P20040 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
P20040 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
P20040 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
P20040 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.48□□□□□ -1.37
P20040 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
P20040 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.48□□□□□ -1.37
P20040 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
P20040 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.47□□□□□ -1.37
P20040 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.47□□□□□ -1.37
P20040 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
P20040 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.47□□□□□ -1.37
P20040 Gm22152-201ENSMUST00000116966 125 ntBASIC6.47□□□□□ -1.37
P20040 Gm13163-201ENSMUST00000119875 336 ntBASIC6.47□□□□□ -1.37
P20040 Gm12642-201ENSMUST00000121098 876 ntBASIC6.47□□□□□ -1.37
P20040 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC6.47□□□□□ -1.37
P20040 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.47□□□□□ -1.37
P20040 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC6.47□□□□□ -1.37
P20040 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.47□□□□□ -1.37
P20040 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
P20040 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.47□□□□□ -1.37
P20040 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm38328-201ENSMUST00000195582 317 ntBASIC6.47□□□□□ -1.37
P20040 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.47□□□□□ -1.37
P20040 Gm18995-201ENSMUST00000202981 520 ntBASIC6.47□□□□□ -1.37
P20040 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.47□□□□□ -1.37
P20040 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 AL590616.1-201ENSMUST00000223339 574 ntBASIC6.47□□□□□ -1.37
P20040 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.47□□□□□ -1.37
P20040 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.47□□□□□ -1.37
P20040 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.47□□□□□ -1.37
P20040 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
P20040 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P20040 Gm43422-201ENSMUST00000199780 3571 ntBASIC6.47□□□□□ -1.37
P20040 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC6.47□□□□□ -1.37
P20040 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P20040 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
P20040 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P20040 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
P20040 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
P20040 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
P20040 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P20040 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.37
P20040 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
P20040 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.46□□□□□ -1.37
P20040 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
P20040 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.46□□□□□ -1.37
P20040 Gm43023-201ENSMUST00000197583 2106 ntBASIC6.46□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms