Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.84□□□□□ -1.48
Sdc1P18828 Gm42597-201ENSMUST00000196663 1544 ntBASIC5.84□□□□□ -1.48
Sdc1P18828 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.84□□□□□ -1.48
Sdc1P18828 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.84□□□□□ -1.48
Sdc1P18828 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sdc1P18828 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sdc1P18828 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm26209-201ENSMUST00000103852 110 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm23131-201ENSMUST00000104253 132 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm9095-201ENSMUST00000117607 881 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm8802-201ENSMUST00000118633 740 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm14153-201ENSMUST00000119923 1139 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm16523-201ENSMUST00000121253 592 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm23021-201ENSMUST00000158765 169 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm20549-201ENSMUST00000174804 429 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.83□□□□□ -1.48
Sdc1P18828 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm2734-201ENSMUST00000208561 743 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 AC153821.1-203ENSMUST00000218105 607 ntTSL 3 BASIC5.83□□□□□ -1.48
Sdc1P18828 AC157570.2-201ENSMUST00000219091 700 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm10054-201ENSMUST00000223362 431 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 CT009515.2-201ENSMUST00000226126 736 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 AC099629.1-201ENSMUST00000226778 464 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 AC122877.1-201ENSMUST00000228873 218 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sdc1P18828 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sdc1P18828 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Sdc1P18828 Bcl2a1d-201ENSMUST00000098486 863 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sdc1P18828 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm11855-201ENSMUST00000121562 1869 ntBASIC5.83□□□□□ -1.48
Sdc1P18828 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sdc1P18828 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sdc1P18828 Gm13106-201ENSMUST00000119045 1443 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Sdc1P18828 AC154738.6-201ENSMUST00000227225 1352 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm12452-201ENSMUST00000117128 331 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm5319-201ENSMUST00000118965 873 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm13649-201ENSMUST00000122325 606 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Trav8-2-201ENSMUST00000130122 337 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC5.82□□□□□ -1.48
Sdc1P18828 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm4781-201ENSMUST00000167995 781 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm10012-202ENSMUST00000170379 372 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm22569-201ENSMUST00000175545 124 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm28117-201ENSMUST00000188472 371 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm37977-201ENSMUST00000193096 721 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm43160-201ENSMUST00000196453 421 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC5.82□□□□□ -1.48
Sdc1P18828 Gm42581-201ENSMUST00000201774 966 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC5.82□□□□□ -1.48
Sdc1P18828 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC5.82□□□□□ -1.48
Sdc1P18828 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.82□□□□□ -1.48
Sdc1P18828 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms