Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm5711-201ENSMUST00000197896 421 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Gm44411-201ENSMUST00000204172 349 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm44566-201ENSMUST00000207638 304 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.54□□□□□ -1.04
Col1a1P11087 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col1a1P11087 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm37962-201ENSMUST00000195535 2034 ntBASIC8.54□□□□□ -1.04
Col1a1P11087 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col1a1P11087 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.54□□□□□ -1.04
Col1a1P11087 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Col1a1P11087 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Col1a1P11087 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Col1a1P11087 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Meis1-201ENSMUST00000068264 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Col1a1P11087 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm15203-201ENSMUST00000117668 455 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm12140-201ENSMUST00000121214 544 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC8.53□□□□□ -1.04
Col1a1P11087 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28739-201ENSMUST00000185415 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28219-201ENSMUST00000185452 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28542-201ENSMUST00000185545 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28303-201ENSMUST00000185642 747 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29244-201ENSMUST00000185825 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29437-201ENSMUST00000185865 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29412-201ENSMUST00000185869 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28910-201ENSMUST00000185921 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28812-201ENSMUST00000185963 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29468-201ENSMUST00000185978 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28335-201ENSMUST00000186204 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28854-201ENSMUST00000186218 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28636-201ENSMUST00000186353 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28452-201ENSMUST00000186623 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29298-201ENSMUST00000186704 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28185-201ENSMUST00000186815 694 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28227-201ENSMUST00000186862 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28796-201ENSMUST00000186905 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29659-201ENSMUST00000187063 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28473-201ENSMUST00000187325 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28558-201ENSMUST00000187373 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28682-201ENSMUST00000187430 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28738-201ENSMUST00000187480 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28949-201ENSMUST00000187805 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28773-201ENSMUST00000187925 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29319-201ENSMUST00000188060 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29422-201ENSMUST00000188062 694 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28734-201ENSMUST00000188104 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28787-201ENSMUST00000188357 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29312-201ENSMUST00000188724 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29451-201ENSMUST00000188862 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29637-201ENSMUST00000188877 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29033-201ENSMUST00000189114 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29614-201ENSMUST00000189263 694 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28751-201ENSMUST00000189287 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29559-201ENSMUST00000189412 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28272-201ENSMUST00000189512 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28483-201ENSMUST00000189519 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28123-201ENSMUST00000189725 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28368-201ENSMUST00000189804 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29119-201ENSMUST00000189973 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28716-201ENSMUST00000190217 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29239-201ENSMUST00000190304 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28837-201ENSMUST00000190397 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28968-201ENSMUST00000190413 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28531-201ENSMUST00000190529 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm28165-201ENSMUST00000190669 694 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm29181-201ENSMUST00000191288 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm38229-201ENSMUST00000191931 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm32347-201ENSMUST00000192944 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm38121-201ENSMUST00000193213 696 ntBASIC8.53□□□□□ -1.04
Col1a1P11087 Gm38035-201ENSMUST00000194427 696 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms