Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Malat1-201ENSMUST00000172812 6983 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Hcn3O88705 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Hcn3O88705 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC7.06□□□□□ -1.28
Hcn3O88705 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Hcn3O88705 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm22934-201ENSMUST00000103961 132 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC7.06□□□□□ -1.28
Hcn3O88705 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm15224-201ENSMUST00000120501 388 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm10086-201ENSMUST00000136334 354 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm23673-201ENSMUST00000157474 298 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Mir6239-201ENSMUST00000183564 105 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm28439-201ENSMUST00000187714 876 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm6750-201ENSMUST00000189273 268 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm28877-201ENSMUST00000191349 604 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm17970-201ENSMUST00000192199 685 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Mir7230-201ENSMUST00000195977 56 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm44285-201ENSMUST00000203557 940 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm18422-201ENSMUST00000203663 1032 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.06□□□□□ -1.28
Hcn3O88705 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC7.06□□□□□ -1.28
Hcn3O88705 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 AC124196.1-201ENSMUST00000225970 1032 ntBASIC7.06□□□□□ -1.28
Hcn3O88705 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Vmn1r42-201ENSMUST00000089419 1098 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Hcn3O88705 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC7.06□□□□□ -1.28
Hcn3O88705 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Hcn3O88705 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC7.06□□□□□ -1.28
Hcn3O88705 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Hcn3O88705 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm14202-201ENSMUST00000120121 311 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm12124-201ENSMUST00000120504 679 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm22764-201ENSMUST00000158370 92 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm22690-201ENSMUST00000175054 110 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm6100-201ENSMUST00000180253 403 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm17867-201ENSMUST00000188981 391 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm44982-201ENSMUST00000208795 471 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm45283-201ENSMUST00000210593 628 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Gm17875-201ENSMUST00000216005 941 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Hcn3O88705 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Hcn3O88705 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
Hcn3O88705 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.05□□□□□ -1.28
Hcn3O88705 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Hcn3O88705 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Hcn3O88705 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms